SCUD (Saccharomyces Cerevisiae Ubiquitination Database)


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Substrate Information

General Information
Systematic nameYKR041W
DescriptionUncharacterized protein YKR041W

Ubiquitination Features
NumberSiteTypeE2E3 ClassE3 SubclassSubstrate ReceptorUbiquitin ReceptorDUBEffect
1K17        
* Blank: not determined, NA: not applicable.

References
[1]EvidencePurification & Protein ID
Methodpurification (ubiquitin-chain by UBA domain-containing protein, 6xHis-ubiquitin (two-step)), LC/MS
Reference"A proteomics approach to understanding protein ubiquitination."
Peng J, Schwartz D, Elias JE, Thoreen CC, Cheng D, Marsischky G, Roelofs J, Finley D, Gygi SP.
Nat Biotechnol. 21(8):921-6 (2003) [12872131]

Cross References
Swiss-Prot accessionP36134
SGD YKR041W
Gene Ontology (GO)
Cellular componentGO:0005737cytoplasmIDA:SGD.
Cellular componentGO:0005634nucleusIDA:SGD.
EC number  

Additional Features
Other Post Translational Modifications (PTM)  

Sequence Information
Sequence length250
Molecular weight29208

	---------+----------+----------+----------+----------+
MSDDDYMNSD DDNDAEKRYV RPIFVRKRRR EEDYVATSKD NIHHHPCDWS   50
AKPSQRQNEN EQKSTIRLVP VAMNTPKCQE KKKKRKGVGT TSHEATLFEY   100
GESIAGYKCV TTESERDRLK RSHESESSSE SEVDVFAFDQ AKGISSKVEA   150
EERYARAVRQ YWRMTKDEPA TLPLPGTPTL AAVSLDMIDD KSVEQFYTMS   200
SALMDANRLD LIRRDRIRWH PDKHRYHKSK VTKLFQAING LWEQEKTEKR   250

	* Ubiquitinated lysine is denoted as red color.