SCUD (Saccharomyces Cerevisiae Ubiquitination Database)


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Substrate Information

General Information
Standard nameSRP40
Systematic nameYKR092C
DescriptionSuppressor protein SRP40

Ubiquitination Features
NumberSiteTypeE2E3 ClassE3 SubclassSubstrate ReceptorUbiquitin ReceptorDUBEffect
1   HECTNARSP5   
* Blank: not determined, NA: not applicable.

References
[1]EvidenceUb-conjugate Confirmation
Methodprotein microarray (in vitro)
Reference"Ubiquitination screen using protein microarrays for comprehensive identification of Rsp5 substrates in yeast."
Gupta R, Kus B, Fladd C, Wasmuth J, Tonikian R, Sidhu S, Krogan NJ, Parkinson J, Rotin D.
Mol Syst Biol. 3:116 (2007) [17551511]

Cross References
Swiss-Prot accessionP32583
SGD YKR092C
Gene Ontology (GO)
Cellular componentGO:0005730nucleolusIDA:SGD.
Molecular functionGO:0005515protein bindingIPI:IntAct.
EC number  

Additional Features
Other Post Translational Modifications (PTM)
Residue indexType
133Phosphoserine.
289Phosphothreonine.
293Phosphoserine.
301Phosphoserine.
308Phosphoserine.
313Phosphoserine.
389Phosphoserine.
394Phosphoserine.

Sequence Information
Sequence length406
Molecular weight41015

	---------+----------+----------+----------+----------+
MASKKIKVDE VPKLSVKEKE IEEKSSSSSS SSSSSSSSSS SSSSSSSSSG   50
ESSSSSSSSS SSSSSDSSDS SDSESSSSSS SSSSSSSSSS DSESSSESDS   100
SSSGSSSSSS SSSDESSSES ESEDETKKRA RESDNEDAKE TKKAKTEPES   150
SSSSESSSSG SSSSSESESG SESDSDSSSS SSSSSDSESD SESDSQSSSS   200
SSSSDSSSDS DSSSSDSSSD SDSSSSSSSS SSDSDSDSDS SSDSDSSGSS   250
DSSSSSDSSS DESTSSDSSD SDSDSDSGSS SELETKEATA DESKAEETPA   300
SSNESTPSAS SSSSANKLNI PAGTDEIKEG QRKHFSRVDR SKINFEAWEL   350
TDNTYKGAAG TWGEKANEKL GRVRGKDFTK NKNKMKRGSY RGGSITLESG   400
SYKFQD                                                   406