SCUD (Saccharomyces Cerevisiae Ubiquitination Database)


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Substrate Information

General Information
Standard nameSNX4
Systematic nameYJL036W
AliasATG24, CVT13
DescriptionSorting nexin-4

Ubiquitination Features
NumberSiteTypeE2E3 ClassE3 SubclassSubstrate ReceptorUbiquitin ReceptorDUBEffect
1         
* Blank: not determined, NA: not applicable.

References
[1]EvidencePurification & Protein ID
Methodpurification (6xHis-Myc-ubiquitin), LC/MS, validation (virtual Western blot)
Reference"Systematic approach for validating the ubiquitinated proteome."
Seyfried NT, Xu P, Duong DM, Cheng D, Hanfelt J, Peng J.
Anal Chem. 80(11):4161-9 (2008) [18433149]

Cross References
Swiss-Prot accessionP47057
SGD YJL036W
Gene Ontology (GO)
Cellular componentGO:0005737cytoplasmIDA:SGD.
Molecular functionGO:0032266phosphatidylinositol 3-phosphate bindingIDA:SGD.
Molecular functionGO:0005515protein bindingIPI:IntAct.
Biological processGO:0006623protein targeting to vacuoleIMP:SGD.
EC number  

Additional Features
Other Post Translational Modifications (PTM)  

Sequence Information
Sequence length423
Molecular weight49002

	---------+----------+----------+----------+----------+
MTDKGKNDLT SKAKDKARGN PEKPPYWFEI IVSDPQKRTG DPGSSSGYVS   50
YQISTKTNNT SFYDNRGDPE SIIVVHRRYS DLLLLHDILL NRFPTCIIPP   100
LPDKKVFQYI AGDRFSQRFT QKRCHSLQNF LRRVSLHPDL SQSKVFKTFL   150
VSKDWESHRK VLQDSLQPNK DEVTDAFMNA FKTVHKQNEE FTEIREKSDK   200
LDRTVTKIDK LFHKVVKKND SMSEDYTKLG SNLQELQELV TGENEELAAK   250
LKIFNEGVTQ LSYGLQDLTK YLDYEYIVDL KDLEHYIDSM RQLIKLKDQK   300
QIDYEELSDY LTRSIKEKNN LISGYGGSNF FANKLEELAG INQEASRREK   350
INKLEGKITS LTGELENAKK VADGFEQECL KEIDHFESVK TAEIKKSLGS   400
LADHHIEFYE RILEAWEKVD DSL                                423