SCUD (Saccharomyces Cerevisiae Ubiquitination Database)


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Substrate Information

General Information
Standard nameSAC6
Systematic nameYDR129C
DescriptionFimbrin

Ubiquitination Features
NumberSiteTypeE2E3 ClassE3 SubclassSubstrate ReceptorUbiquitin ReceptorDUBEffect
1         
* Blank: not determined, NA: not applicable.

References
[1]EvidencePurification & Protein ID
Methodpurification (HB-ubiquitin (a tandem affinity tag under denaturing conditions)), LC/MS
Reference"A tandem affinity tag for two-step purification under fully denaturing conditions: application in ubiquitin profiling and protein complex identification combined with in vivocross-linking."
Tagwerker C, Flick K, Cui M, Guerrero C, Dou Y, Auer B, Baldi P, Huang L, Kaiser P.
Mol Cell Proteomics. 5(4):737-48 (2006) [16432255]

Cross References
Swiss-Prot accessionP32599
SGD YDR129C
Gene Ontology (GO)
Cellular componentGO:0030482actin cableIDA:SGD.
Cellular componentGO:0030479actin cortical patchIDA:SGD.
Molecular functionGO:0051015actin filament bindingIDA:SGD.
Molecular functionGO:0030674protein binding, bridgingIDA:SGD.
Biological processGO:0007015actin filament organizationIMP:SGD.
Biological processGO:0007121bipolar cellular bud site selectionIMP:SGD.
Biological processGO:0006897endocytosisIMP:SGD.
Biological processGO:0006970response to osmotic stressIMP:SGD.
EC number  

Additional Features
Other Post Translational Modifications (PTM)
Residue indexType
466Phosphoserine.

Sequence Information
Sequence length642
Molecular weight71773

	---------+----------+----------+----------+----------+
MNIVKLQRKF PILTQEDLFS TIEKFRAIDL DDKGWVEKQQ ALEAVSKDGD   50
ATYDEARETL KHVGVDASGR VELDDYVGLV AKLRESKTGA APQTTFNVAP   100
NSTPIVSTAA TGLQHKGKGT QAKIIVAGSQ TGTTHTINEE ERREFTKHIN   150
SVLAGDQDIG DLLPFPTDTF QLFDECRDGL VLSKLINDSV PDTIDTRVLN   200
WPKKGKELNN FQASENANIV INSAKAIGCV VVNVHSEDII EGREHLILGL   250
IWQIIRRGLL SKIDIKLHPE LYRLLEDDET LEQFLRLPPE QILLRWFNYH   300
LKQANWNRRV TNFSKDVSDG ENYTILLNQL DPALCSKAPL QTTDLMERAE   350
QVLQNAEKLD CRKYLTPSSL VAGNPKLNLA FVAHLFNTHP GLEPIQEEEK   400
PEIEEFDAEG EREARVFTLW LNSLDVDPPV ISLFDDLKDG LILLQAYEKV   450
MPGAVDFKHV NKRPASGAEI SRFKALENTN YAVDLGRAKG FSLVGIEGSD   500
IVDGNKLLTL GLVWQLMRRN ISITMKTLSS SGRDMSDSQI LKWAQDQVTK   550
GGKNSTIRSF KDQALSNAHF LLDVLNGIAP GYVDYDLVTP GNTEEERYAN   600
ARLAISIARK LGALIWLVPE DINEVRARLI ITFIASLMTL NK           642