SCUD (Saccharomyces Cerevisiae Ubiquitination Database)


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Substrate Information

General Information
Standard nameRIX7
Systematic nameYLL034C
DescriptionRibosome biogenesis ATPase RIX7

Ubiquitination Features
NumberSiteTypeE2E3 ClassE3 SubclassSubstrate ReceptorUbiquitin ReceptorDUBEffect
1         
* Blank: not determined, NA: not applicable.

References
[1]EvidencePurification & Protein ID
Methodpurification (6xHis-Myc-ubiquitin), LC/MS, validation (virtual Western blot)
Reference"Systematic approach for validating the ubiquitinated proteome."
Seyfried NT, Xu P, Duong DM, Cheng D, Hanfelt J, Peng J.
Anal Chem. 80(11):4161-9 (2008) [18433149]

Cross References
Swiss-Prot accessionQ07844
SGD YLL034C
Gene Ontology (GO)
Cellular componentGO:0005730nucleolusIDA:SGD.
Biological processGO:0000055ribosomal large subunit export from nucleusIMP:SGD.
EC number  

Additional Features
Other Post Translational Modifications (PTM)  

Sequence Information
Sequence length837
Molecular weight93069

	---------+----------+----------+----------+----------+
MVKVKSKKNS LTSSLDNKIV DLIYRLLEEK TLDRKRSLRQ ESQGEEGENN   50
EGEEDEDIFE SMFFAKDLTA GEIFTFCLTK DLSLQRVKKV VLQKTIDRML   100
KDVIESELEE FGSYPGYNNE EEEKPSLEEE LAKKNMMIER DTNEMNKRIT   150
STWSKSGSVS ESITETDDPK TEEVKKSKKR SKEGTCKVKR QKIKEDRSPP   200
NSSLKSLGGM DDVVAQLMEL IGLPILHPEI FLSTGVEPPR GVLLHGPPGC   250
GKTSIANALA GELQVPFISI SAPSVVSGMS GESEKKIRDL FDEARSLAPC   300
LVFFDEIDAI TPKRDGGAQR EMERRIVAQL LTSMDELTME KTNGKPVIII   350
GATNRPDSLD AALRRAGRFD REICLNVPNE VSRLHILKKM SDNLKIDGAI   400
DFAKLAKLTP GFVGADLKAL VTAAGTCAIK RIFQTYANIK STPTTATDSS   450
EDNMEIDETA NGDESSLKNT ANMIDPLPLS VVQQFIRNYP EPLSGEQLSL   500
LSIKYEDFLK ALPTIQPTAK REGFATVPDV TWANVGALQR VRLELNMAIV   550
QPIKRPELYE KVGISAPGGV LLWGPPGCGK TLLAKAVANE SRANFISIKG   600
PELLNKYVGE SERSIRQVFT RARASVPCVI FFDELDALVP RRDTSLSESS   650
SRVVNTLLTE LDGLNDRRGI FVIGATNRPD MIDPAMLRPG RLDKSLFIEL   700
PNTEEKLDII KTLTKSHGTP LSSDVDFEEI IRNEKCNNFS GADLAALVRE   750
SSVLALKRKF FQSEEIQSVL DNDLDKEFED LSVGVSGEEI IVTMSDFRSA   800
LRKIKPSVSD KDRLKYDRLN KKMGLTEEMK DAEEMKQ                 837