SCUD (Saccharomyces Cerevisiae Ubiquitination Database)


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Substrate Information

General Information
Standard nameREX2
Systematic nameYLR059C
AliasYNT20
DescriptionOligoribonuclease, mitochondrial

Ubiquitination Features
NumberSiteTypeE2E3 ClassE3 SubclassSubstrate ReceptorUbiquitin ReceptorDUBEffect
1         
* Blank: not determined, NA: not applicable.

References
[1]EvidencePurification & Protein ID
Methodpurification (6xHis-Myc-ubiquitin), LC/MS, validation (virtual Western blot)
Reference"Systematic approach for validating the ubiquitinated proteome."
Seyfried NT, Xu P, Duong DM, Cheng D, Hanfelt J, Peng J.
Anal Chem. 80(11):4161-9 (2008) [18433149]

Cross References
Swiss-Prot accessionP54964
SGD YLR059C
Gene Ontology (GO)
Cellular componentGO:0005739mitochondrionIDA:SGD.
Molecular functionGO:00084083'-5' exonuclease activityIMP:SGD.
Molecular functionGO:0005515protein bindingIPI:IntAct.
Biological processGO:0006396RNA processingIMP:SGD.
EC number 3.1.-.-

Additional Features
Other Post Translational Modifications (PTM)  

Sequence Information
Sequence length269
Molecular weight30870

	---------+----------+----------+----------+----------+
MKWLLFPARI VARTRPNLFS LYRRSVSQYL RPRTIQNLQS MAQTPELKTK   50
LFKPLVWIDC EMTGLDHVND RIIEICCIIT DGHLAPVKAA DGQGDSHYES   100
VIHYGPEVMN KMNEWCIEHH GNSGLTAKVL ASEKTLAQVE DELLEYIQRY   150
IPDKNVGVLA GNSVHMDRLF MVREFPKVID HLFYRIVDVS SIMEVARRHN   200
PALQARNPKK EAAHTAYSDI KESIAQLQWY MDNYLKPPQE TESVESIGSE   250
QPESPSSSTS SLKRQRTDF                                     269