SCUD (Saccharomyces Cerevisiae Ubiquitination Database)


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Substrate Information

General Information
Standard nameGFD1
Systematic nameYMR255W
DescriptionmRNA transport factor GFD1

Ubiquitination Features
NumberSiteTypeE2E3 ClassE3 SubclassSubstrate ReceptorUbiquitin ReceptorDUBEffect
1         
* Blank: not determined, NA: not applicable.

References
[1]EvidencePurification & Protein ID
Methodpurification (6xHis-Myc-ubiquitin), LC/MS, validation (virtual Western blot)
Reference"Systematic approach for validating the ubiquitinated proteome."
Seyfried NT, Xu P, Duong DM, Cheng D, Hanfelt J, Peng J.
Anal Chem. 80(11):4161-9 (2008) [18433149]

Cross References
Swiss-Prot accessionQ04839
SGD YMR255W
Gene Ontology (GO)
Cellular componentGO:0005737cytoplasmIDA:SGD.
Cellular componentGO:0005643nuclear poreIDA:SGD.
Biological processGO:0006406mRNA export from nucleusIGI:SGD.
EC number  

Additional Features
Other Post Translational Modifications (PTM)
Residue indexType
87Phosphoserine.
106Phosphoserine.
111Phosphoserine.

Sequence Information
Sequence length188
Molecular weight21571

	---------+----------+----------+----------+----------+
MPLESIWADA PDEEPIKKQK PSHKRSNNNK KNNNSRWSNE SSSNNKKKDS   50
VNKVKNNKGN HESKTKNKIK ETLPREKKPP HSQGKISPVS ESLAINPFSQ   100
KATEISPPPV SPSKMKTTKT QSKQDTASKM KLLKKKIEEQ REILQKTHHK   150
NQQQQVLMDF LNDEGSSNWV DDDEEELILQ RLKTSLKI                188