SCUD (Saccharomyces Cerevisiae Ubiquitination Database)


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Substrate Information

General Information
Standard nameCOG4
Systematic nameYPR105C
AliasCOD1, SEC38, SGF1
DescriptionConserved oligomeric Golgi complex subunit 4

Ubiquitination Features
NumberSiteTypeE2E3 ClassE3 SubclassSubstrate ReceptorUbiquitin ReceptorDUBEffect
1         
* Blank: not determined, NA: not applicable.

References
[1]EvidencePurification & Protein ID
Methodpurification (6xHis-Myc-ubiquitin), LC/MS, validation (virtual Western blot)
Reference"Systematic approach for validating the ubiquitinated proteome."
Seyfried NT, Xu P, Duong DM, Cheng D, Hanfelt J, Peng J.
Anal Chem. 80(11):4161-9 (2008) [18433149]

Cross References
Swiss-Prot accessionQ06096
SGD YPR105C
Gene Ontology (GO)
Cellular componentGO:0017119Golgi transport complexIPI:SGD.
Molecular functionGO:0005515protein bindingIPI:IntAct.
Biological processGO:0000301retrograde transport, vesicle recycling wit...IMP:SGD.
EC number  

Additional Features
Other Post Translational Modifications (PTM)  

Sequence Information
Sequence length861
Molecular weight98666

	---------+----------+----------+----------+----------+
MEGQKSNASW ESSIIEGQLS KNLARYTLLL DKLSTLSQID KLSEVIANDY   50
AKQSKQLNAF VQQSQSSLNK ESRKLELQRT NLTTTLTQFH ETVATISSSN   100
ARAKAIHDDI ETVDQERALV NKTLQFVKDV RTLKNNISLA HSALETKDYL   150
VAATAINEIR SLPDKKLIVS EFAKKVVPSS EIPEEPAILI KNWCKELTSL   200
FQEQFMEATR TQDIKELTLM FKMFPMIGQD VLGLDLYSKY VCDIIADESR   250
KIMSNSMENS TKFQGFFSQV LLHLFKIVST IINDHSKVIA TCYGKKHMVH   300
VMEKVEKEAD LQASLILDIF METRKIERTI HDINEWEHSQ KNEDVNIDSN   350
QSDIETDGET EKSSIISIHD LALLIMEFSQ ILQNWSMYSR FYSVKWNEFS   400
DLHPHVLQPP PPIADGKFAL KLKQDKVFDE FQVFVLNHLQ RSFRNSISLE   450
ELPSLNDLIT AVPLNDHDNI SYPVTSVLDD LILLVRKNLI SVVNTGQFKL   500
LASFLNELVK FFQNRFLVKF MQNKFKLLQS KLASNVSLKR YIPKGEEQSA   550
TSRSVSPPAN KFSPLSRFTF RGAAASALTN IQSNLQAVVA EDEDSILALH   600
HYLIYLNTLY LSKVYVHRLL SIEILEDDSQ RILRDNFPFD NDAAQLQNLI   650
INSEKLVLEQ TDKLSKWAVK YLFQNILQNR VRNLLGTVFV NSASSNSSTS   700
NQKNVSRDYS AGSNQKNYIT SIEDFEDLSQ INSFNSKWNQ LIIPYKNILH   750
NEAYAELLSV IVDYIVTTLE QRIWTLEFNE LGVTKLDREL SLFIGNMCGL   800
NYNLREKFLK LTQIVLLLGL DDDNFDLTTG DIKDDFNGTF DWVINSQERI   850
KARNMKIDRT Q                                             861